Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016- 04-26] 4,102 sequences; 141,916,335 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq2866 75.2 9e-12 >seq2866 Length=2748 Score = 75.2 bits (82), Expect = 9e-12 Identities = 107/151 (71%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||||||| |||||||||||||| ||| | | ||| |||| ||| || |||| Sbjct 2093 TCGAGTTTCAGACTACAATCCGAACTGAGGTTGGGTTTAACAGATTGGCTAGCCTTCGCA 2034 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 || | || | ||| |||||||||| ||| |||| |||| |||| | || Sbjct 2033 GGATCGCTACTGATTGTCCCAACCATTGTATTACGCGTGACGCCCAGGGTGTAAGAGGCA 1974 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCC 151 || ||||||||||||||| ||||||||||| Sbjct 1973 TGCTGACTTGACGTCATCCTCACCTTCCTCC 1943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415983468940