Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016-
04-26] 4,102 sequences; 141,916,335 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq2866 188 1e-45
>seq2866
Length=2748
Score = 188 bits (208), Expect = 1e-45
Identities = 214/286 (75%), Gaps = 1/286 (0%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | |||| | |||||||||| ||||||||| ||
Sbjct 1555 GCTTTCGTTTCTCAGTGTCAGTCTTGGCCCAGTAGAGCGCCTTCGCCGCTGGTGTTCTTC 1496
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| ||| |||||||||||||||||| |||| |||||||| | ||||| | ||||||||
Sbjct 1495 CATATCTCTACGCATTTCACCGCTCCACATGGAATTCCCTCTACCTCTACCACACTCAAG 1436
Query 126 AAAAACAGTT-TCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCC 184
||| || | ||| ||| ||||||||| | ||| ||| ||||| |
Sbjct 1435 CTCGTGAGTACTCCACTGCCTGCTCGAGGTTGAGCCTCGATATTTGACAGTAGACTTTAC 1376
Query 185 TTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244
|| |||||| | |||||| |||||| | |||||||||||||||| ||| |||||
Sbjct 1375 GAGCCACCTACAAACGCTTTACGCCCAATCATTCCGGATAACGCTTGCTCCCTCTGTATT 1316
Query 245 ACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
||||||||||||||||| ||||||||| |||||||| |||| ||
Sbjct 1315 ACCGCGGCTGCTGGCACAGAGTTAGCCGGAGCTTATTCATCAGATA 1270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 828767065042
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |