Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016- 04-26] 4,102 sequences; 141,916,335 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq2680 113 5e-23 >seq2680 Length=3449 Score = 113 bits (124), Expect = 5e-23 Identities = 134/177 (76%), Gaps = 5/177 (3%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||| ||||| ||||||||||||||| |||| ||||| ||| |||||| Sbjct 3081 TTACTTTGAGTAAAATAGAGTGTTCAAAGCAGGCCTACGCTCTGAATAATTTAGCATGGA 3022 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| ||||||| | | |||| || ||| | | |||||| |||||||| | Sbjct 3021 ATAACGCGATAGGACT--CTGGCCTATCC-GTTGGTCTGTGGGACCGGA-GTAATGATTA 2966 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | | | | ||||||||| | ||||| |||||| |||||||||||||||||||| Sbjct 2965 AGAGGAACAGTCGGGGGCATTCGTATTGCGTTGTCAGAGGTGAAATTCTTGGATTTA 2909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511979654080