Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016-
04-26] 4,102 sequences; 141,916,335 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq2866 237 4e-60
>seq2866
Length=2748
Score = 237 bits (262), Expect = 4e-60
Identities = 299/408 (73%), Gaps = 16/408 (4%)
Strand=Plus/Plus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
||| || |||| |||||||||| |||||||||||||||||||||| |||| || |||
Sbjct 1274 TGATGAATAAGCTCCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGAGCAAGC 1333
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
|||||||||||| | ||||||||||| || |||||||| | | ||||| || |||
Sbjct 1334 GTTATCCGGAATGATTGGGCGTAAAGCGTTTGTAGGTGGCTCGTAAAGTCTACTGTCAAA 1393
Query 125 GGCTAT---GGCTCAACCCCGGGACTGCTTTTGAA-ACTGCAGGGCTAGAGTGCAGGAGG 180
||| ||||||||| || | || | || ||| | ||| ||||| | ||
Sbjct 1394 ---TATCGAGGCTCAACCTCGAGCAGGCAGTGGAGTACTCACGAGCTTGAGTGTGGTAGA 1450
Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240
|| | |||||||| ||| |||||||||||||||||| || ||| ||||||||| ||
Sbjct 1451 GGTAGAGGGAATTCCATGTGGAGCGGTGAAATGCGTAGAGATATGGAAGAACACCAGCGG 1510
Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAG 300
|||||||| | |||| | |||||||||||| ||||||| ||||| || ||
Sbjct 1511 CGAAGGCGCTCTACTGGGCCAAGACTGACACTGAGAAACGAAAGCTAAGGGAGTGAATAG 1570
Query 301 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAA 360
||||||||||||| ||| || || |||||| ||||| |||| ||| | || ||
Sbjct 1571 GATTAGATACCCTAGTAATCTTAGCTGTAAACTATGAAGACTAAGTGCTG----CCAAAA 1626
Query 361 GTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | |||| | ||| ||||| ||||| |||| |||||||||||
Sbjct 1627 G-----CAGTGCTGTAGCTAACGCGTTAAGTCTTCCGCCTGGGGAGTA 1669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203150644736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |