Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016-
04-26] 4,102 sequences; 141,916,335 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq2801 682 0.0
>seq2801
Length=2965
Score = 682 bits (756), Expect = 0.0
Identities = 477/536 (89%), Gaps = 10/536 (2%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| |||||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 1242 CTTTTGTTCTACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 1183
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||
Sbjct 1182 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCACCTGGATC 1123
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGT-TCCGCTTCATT 184
| | | ||||| |||| | |||| | || ||| || || | ||| | ||
Sbjct 1122 GACAC-CGAAGTGCCTTGGATCTAGAAGCAGGGACGG---AGTCCCGACTCCAAGTAATG 1067
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244
|| ||||||||| |||| ||| ||||||||||||||| |||||| |||||||||
Sbjct 1066 GAATAAGTAAAACAACGTTAAAAGTAGTGGTATTTCACCGTTGCCGAA---GCTCCCACT 1010
Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1009 TATTCTACACCTCTTAAGTTATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 950
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 949 TCTTTCCCCGCTGTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 890
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 830
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 829 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 770
Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTT 540
||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 769 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACATC-CTTT 715
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635132924096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |