Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016-
04-26] 4,102 sequences; 141,916,335 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq2866 196 1e-47
>seq2866
Length=2748
Score = 196 bits (216), Expect = 1e-47
Identities = 220/295 (75%), Gaps = 17/295 (6%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||| |||||||||| || ||| |||
Sbjct 1310 GGCTGCTGGCACAGAGTTAGCCGGAGCTTATTCATCAGATAC---------------CGT 1266
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
|| ||||| ||| || ||||||||||||||| | || || ||||||||||||||||
Sbjct 1265 C-AATGTTTTCTTCTCTGATAAAAGAAGTTTACGAACCACAGT-CCTTCATCCTTCACGC 1208
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||||||||||||||||||||||
Sbjct 1207 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCTCACTGCTGCCTCCCGTAG 1148
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | |||||||||| | ||| ||
Sbjct 1147 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACTGAT 1088
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295
||| | || ||| ||| ||||||| || |||| ||||| ||||| ||| ||
Sbjct 1087 CGTGGCCTTGGTAGGCTTTTACCCCACCAACTAGCTAATCAGACGCAAGCCCCTC 1033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1068756157824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |