Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016- 04-26] 4,102 sequences; 141,916,335 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq2801 82.4 1e-13 >seq2801 Length=2965 Score = 82.4 bits (90), Expect = 1e-13 Identities = 93/121 (77%), Gaps = 3/121 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || | | || |||||||| | ||| |||||| || | | Sbjct 1567 GTACGAGAGGAACCGCCGAGT-CTGA-TAATTGGTAAT-GCGCTCGTCTGAAAAGACGAT 1623 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||| | | | ||| ||||||||||||||||||||| ||||| | Sbjct 1624 GGCGCGAAGCTAACATCGGTAGTCTAATGACTGAACGCCTCTAAGTCAGAAGACATGCTA 1683 Query 121 G 121 | Sbjct 1684 G 1684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819167446528