Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20debaryana_20[genbank_20GCA_5F001662405.1_202016-04- 26] 10,139 sequences; 120,364,444 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq4701 91.5 2e-16 seq4842 84.2 2e-14 >seq4701 Length=5848 Score = 91.5 bits (100), Expect = 2e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || ||||||| || |||| |||||||||||| ||| ||| ||| Sbjct 3938 CAAACCGACACAGGTGGTCGGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAG 3997 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 |||||||||||| || | | |||||||||||| || Sbjct 3998 GAACTAGGCAAAATGGCACCGTAACTTCGGGAGAA 4032 >seq4842 Length=5562 Score = 84.2 bits (92), Expect = 2e-14 Identities = 121/167 (72%), Gaps = 3/167 (2%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| |||| ||| || |||| |||| || ||| ||| | | | |||| Sbjct 2471 AAACCGACACAGGTAGGTTGGTAGAGAATACCAAGGGGCGCGAGAGAA-CTCTCTCTAAG 2529 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143 ||||| ||||||||| ||| |||||||||| | || ||| || | || | || Sbjct 2530 GAACTCGGCAAACTGGCCCCGTAACTTCGGAAGAAGGGGCGCCCAGGATTAATTTCTTGG 2589 Query 144 G-CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||||| || || |||||| |||||||| |||||||||||| || Sbjct 2590 GTCGCAGTGACCCGGCCCAGGCGACTGTTTACCAAAAACACAGGTCT 2636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531147824706