Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20debaryana_20[genbank_20GCA_5F001662405.1_202016-04- 26] 10,139 sequences; 120,364,444 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq214 82.4 1e-13 >seq214 Length=68607 Score = 82.4 bits (90), Expect = 1e-13 Identities = 93/121 (77%), Gaps = 3/121 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || | |||| ||||||| | || ||||||| || || | Sbjct 55052 GTACGAGAGGAACCGCCGAGT-CAGA-TAATTGGAAAT-GCCCTTGTCTGAAAAGACAAT 54996 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||| | |||| || | ||| ||||||||||||||||||||| | ||||| Sbjct 54995 GGGGCGAAGCTTACCTCTGTTGTCTAATGACTGAACGCCTCTAAGTCAGAAGACGTGCCA 54936 Query 121 G 121 | Sbjct 54935 G 54935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819119536896