Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20debaryana_20[genbank_20GCA_5F001662405.1_202016-04- 26] 10,139 sequences; 120,364,444 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1311 129 5e-25 >seq1311 Length=25178 Score = 129 bits (142), Expect = 5e-25 Identities = 122/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || || || || ||||| ||| ||||||| || ||||| || || |||||| | Sbjct 6347 CATGAACAGGTCGGGGATCCACAGGCCGTAGAAAAGGTCGCGGGCACGCGCCTCCTCCTT 6288 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 |||||| || ||||||| ||| ||||| ||||| | ||| || ||||| || |||| ||| Sbjct 6287 GCCGTGGTTCTTGCGCAGGTCCAGGAAGTCAAACACGTCCGCGTGCCAGGGCTCCATGTA 6228 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTG 66495 ||||||||||| |||| | || |||||||| || || Sbjct 6227 GATGGCGAACGCGCCCTTGCGCTTGCCGCCGCCCTG 6192 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 66048 CGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTT 66107 |||| ||||| || || ||||||||||| || ||| |||||||||| ||||| | Sbjct 7395 CGGTGTACTCTACGATCTCGGTGCACAGGTTGGAGCACTTGATGGTGCCCAGGTTCTGCT 7336 Query 66108 GATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTT 66167 | || ||||| ||||| || |||||||||| ||||||||| | |||||||| || | Sbjct 7335 GGTTGGACTTGCTGTTGCAGGCGTCCTTGTACAGCATGTACGGGTTACCGGTCTCGACCT 7276 Query 66168 GGG 66170 ||| Sbjct 7275 GGG 7273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397518872894960