Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20debaryana_20[genbank_20GCA_5F001662405.1_202016-04- 26] 10,139 sequences; 120,364,444 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq7788 111 7e-19 seq1 84.2 9e-11 >seq7788 Length=1964 Score = 111 bits (122), Expect = 7e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 349065 TGGGCGTGGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCG 349124 || ||| |||| || |||||||||| | |||| ||||| ||||||||| ||| | Sbjct 1716 TGCGCGCTGCGTTGATGATCTCCTTGATGCGCGGCACTCCCAGCGTCACGTTCATGGAGG 1657 Query 349125 CGACGCCGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACT 349184 | || ||||| ||||||||||||| |||||||| ||||||| ||||||||||||| ||| Sbjct 1656 CCACTCCGGCGAAGTGGAAGGTCTTGAGGGTCATCTGCGTGCCGGGCTCGCCGATGGACT 1597 Query 349185 G 349185 | Sbjct 1596 G 1596 >seq1 Length=262958 Score = 84.2 bits (92), Expect = 9e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 |||| |||| | ||||| |||||| |||||||||||||||| || ||||| |||||||| Sbjct 22871 CTCCGTGAGGCGGGGCACGCCCAGCGTCACGTTCTTGGCCGACACACCGGCGAAGTGGAA 22930 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGG 349169 || | ||| |||| ||||| || || Sbjct 22931 CGTGTTGAGCGTCATCTGCGGGAAGG 22956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084461774633922