Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1163 235 1e-59 >seq1163 Length=8794 Score = 235 bits (260), Expect = 1e-59 Identities = 202/245 (82%), Gaps = 5/245 (2%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 ||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct 8403 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 8344 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | ||||||| | | |||| | |||||| | | |||||| ||||||||||| Sbjct 8343 ATAACACGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGAGTAATGATTAA 8287 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||| |||||||||| | |||||| ||||||||||||||||||||||||||| || Sbjct 8286 GAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTACGGA 8227 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| |||||||||| || |||||||| ||||||| |||| ||||||||||| Sbjct 8226 AGACGAACATCTGCGAAAGCATTTGCCAAGGATACTTTCATTGATCA-AGAACGAAAGTT 8168 Query 314 AGGGG 318 |||| Sbjct 8167 GGGGG 8163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915185741184