Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq1558 102 9e-20 >seq1558 Length=203828 Score = 102 bits (112), Expect = 9e-20 Identities = 125/167 (75%), Gaps = 3/167 (2%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| |||| ||| || |||| |||| || ||| ||| | | | |||| Sbjct 43463 AAACCGACACAGGTAGGTTGGTAGAGAATACCAAGGGGCGCGAGAGAA-CTCTCTCTAAG 43521 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143 ||||| ||||||||| ||| |||||||||| | || ||| || | || || || || Sbjct 43522 GAACTCGGCAAACTGGCCCCGTAACTTCGGAAGAAGGGGCACCCATCCGTAACAAGGTGG 43581 Query 144 G-CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||||| || ||| |||||| |||||||| |||||||||||| || Sbjct 43582 GTCGCAGTGACCAGGCCCAGGCGACTGTTTACCAAAAACACAGGTCT 43628 Score = 102 bits (112), Expect = 9e-20 Identities = 125/167 (75%), Gaps = 3/167 (2%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| |||| ||| || |||| |||| || ||| ||| | | | |||| Sbjct 150740 AAACCGACACAGGTAGGTTGGTAGAGAATACCAAGGGGCGCGAGAGAA-CTCTCTCTAAG 150682 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143 ||||| ||||||||| ||| |||||||||| | || ||| || | || || || || Sbjct 150681 GAACTCGGCAAACTGGCCCCGTAACTTCGGAAGAAGGGGCACCCATCCGTAACAAGGTGG 150622 Query 144 G-CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||||| || ||| |||||| |||||||| |||||||||||| || Sbjct 150621 GTCGCAGTGACCAGGCCCAGGCGACTGTTTACCAAAAACACAGGTCT 150575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531191982532