Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq982 352 5e-95 seq1504 268 2e-69 >seq982 Length=8053 Score = 352 bits (390), Expect = 5e-95 Identities = 224/243 (92%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 51 ACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAA 110 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2 ACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAA 61 Query 111 CGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCA 170 ||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 62 CGCTTGGTGAATGCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCA 121 Query 171 ACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCA 230 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 122 ACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACA 181 Query 231 CCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTA 290 |||||||| |||||| ||| | ||||||||||||||||||| |||||| ||||||| Sbjct 182 CCTCTAGCTTCAAATCCCGAAAGGCTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTA 241 Query 291 TTC 293 ||| Sbjct 242 TTC 244 >seq1504 Length=634305 Score = 268 bits (296), Expect = 2e-69 Identities = 177/195 (91%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| ||||||| || | || ||||| | ||||||||||||||||||||||||| Sbjct 1848 TACTGAGCCGAATTACTATGGCGGAATCGGTCCAACAGTAGGGTAAAACTAACCTGTCTC 1907 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1908 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 1967 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1968 AATGCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 2027 Query 180 TGAACGCTTGGCTGC 194 ||||||||||||||| Sbjct 2028 TGAACGCTTGGCTGC 2042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854386688448