Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq1558 187 5e-45 >seq1558 Length=203828 Score = 187 bits (206), Expect = 5e-45 Identities = 214/283 (76%), Gaps = 15/283 (5%) Strand=Plus/Minus Query 24 CCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCC 83 ||||||| | || || || ||||||||||||||||||||||||||||||||||||||||| Sbjct 38903 CCCATTGCGAAAAATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCC 38844 Query 84 CAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTA-T 142 || |||||| | ||| |||||||| || ||||| | |||| | ||||| ||| ||| Sbjct 38843 CAGTGTGGCTGATCATCCTCTCAGACCAGCTACTGCTCGTGGCCTTGGGAGGCCGTTACC 38784 Query 143 CTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATAAATCTTTGGTCAAAGA 202 | ||||||||| |||||| | ||| ||||| ||| || ||| | ||| || Sbjct 38783 CCCACCAACTAGCTAATCAGACGCAAGCCCCTCTATCGGCGGT-----TTT--TC----- 38736 Query 203 ATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTC 262 | | | ||||| | | |||| ||||||||| |||||| || ||||| || ||| Sbjct 38735 ACCTTTCACTCCTCAG-CTGTATGGGGTATTAGCAACAGTTTCCCAATGTTATCCCCCTC 38677 Query 263 TGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACTA 305 || ||| ||||| || ||| ||||| ||||||| |||||||| Sbjct 38676 CGATAGGTAGGTT-CTTACGCGTTACGCACCCGTTCGCCACTA 38635 Score = 187 bits (206), Expect = 5e-45 Identities = 214/283 (76%), Gaps = 15/283 (5%) Strand=Plus/Plus Query 24 CCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCC 83 ||||||| | || || || ||||||||||||||||||||||||||||||||||||||||| Sbjct 155300 CCCATTGCGAAAAATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCC 155359 Query 84 CAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTA-T 142 || |||||| | ||| |||||||| || ||||| | |||| | ||||| ||| ||| Sbjct 155360 CAGTGTGGCTGATCATCCTCTCAGACCAGCTACTGCTCGTGGCCTTGGGAGGCCGTTACC 155419 Query 143 CTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATAAATCTTTGGTCAAAGA 202 | ||||||||| |||||| | ||| ||||| ||| || ||| | ||| || Sbjct 155420 CCCACCAACTAGCTAATCAGACGCAAGCCCCTCTATCGGCGGT-----TTT--TC----- 155467 Query 203 ATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTC 262 | | | ||||| | | |||| ||||||||| |||||| || ||||| || ||| Sbjct 155468 ACCTTTCACTCCTCAG-CTGTATGGGGTATTAGCAACAGTTTCCCAATGTTATCCCCCTC 155526 Query 263 TGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACTA 305 || ||| ||||| || ||| ||||| ||||||| |||||||| Sbjct 155527 CGATAGGTAGGTT-CTTACGCGTTACGCACCCGTTCGCCACTA 155568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998384444928