Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq1558 102 6e-20 >seq1558 Length=203828 Score = 102 bits (112), Expect = 6e-20 Identities = 107/139 (77%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| | || |||||||||| | || | Sbjct 44277 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACGCGGCACCGTCGGATCACTAAGGCCGG 44218 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT-- 118 ||||||| |||||| | |||| | ||| ||| |||||| | |||||||| || |||| Sbjct 44217 CTTTCGCCCCTGCTCGACTTGTAGGTCTTGCAGTCAAGCTCCCTTTTGCCTTTACACTCA 44158 Query 119 ATCACTACGATTTCCGACC 137 || || |||||||| || Sbjct 44157 ATGTCT--GATTTCCGTCC 44141 Score = 102 bits (112), Expect = 6e-20 Identities = 107/139 (77%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| | || |||||||||| | || | Sbjct 149926 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACGCGGCACCGTCGGATCACTAAGGCCGG 149985 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT-- 118 ||||||| |||||| | |||| | ||| ||| |||||| | |||||||| || |||| Sbjct 149986 CTTTCGCCCCTGCTCGACTTGTAGGTCTTGCAGTCAAGCTCCCTTTTGCCTTTACACTCA 150045 Query 119 ATCACTACGATTTCCGACC 137 || || |||||||| || Sbjct 150046 ATGTCT--GATTTCCGTCC 150062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351994858600