Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1504 86.0 1e-14 >seq1504 Length=634305 Score = 86.0 bits (94), Expect = 1e-14 Identities = 88/111 (79%), Gaps = 3/111 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || | |||| |||||||| | || ||||||| || || | Sbjct 1850 GTACGAGAGGAACCGCCGAGT-CAGA-TAATTGGTAAT-GCCCTTGTCTGAAAAGACAAT 1794 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAA 111 | ||||||||| |||||| | | ||| ||||||||||||||||||||| Sbjct 1793 GGGGCGAAGCTAACATCTGTAGTCTAATGACTGAACGCCTCTAAGTCAGAA 1743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819187635712