Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016-
04-26] 6,890 sequences; 122,189,241 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq4919 300 2e-79
seq2426 82.4 1e-13
>seq4919
Length=2758
Score = 300 bits (332), Expect = 2e-79
Identities = 223/256 (87%), Gaps = 5/256 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| |
Sbjct 1429 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-C 1372
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||||||||| || ||||||||| ||||||||||||||||| | ||| |||||||
Sbjct 1371 CTCGTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGACGCGGTTTACAAGATTA 1312
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| ||| |||||||||| |||| |||||||| | ||||||||||||||||||||
Sbjct 1311 CCCGGGCCTCTCGGCCAAGG--ATAGGCTCGTTGATCGCGTCAGTGTAGCGCGCGTGCGG 1254
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||||||||||||||||| |||||| |||||| | | ||||| |
Sbjct 1253 CCCAGAACATCTAAGGGCATCACAGACCTGTTATCGCCTCATACTTCCATTGGCTAAACG 1194
Query 241 GCCAT-CTCCCTCGAA 255
| || |||||| ||
Sbjct 1193 CCAATAGTCCCTCTAA 1178
>seq2426
Length=13171
Score = 82.4 bits (90), Expect = 1e-13
Identities = 60/67 (90%), Gaps = 2/67 (3%)
Strand=Plus/Plus
Query 26 CGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAAT 85
|||||||| |||||||||||||||| ||| ||| ||||||||||||| | |||||||||
Sbjct 10598 CGCGAGCT-GATGACTCGCGCTTACGAGGCATT-CCTCGTTGAAGACTCATAATTGCAAT 10655
Query 86 GATCTAT 92
|||||||
Sbjct 10656 GATCTAT 10662
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751949806350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |