Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016- 04-26] 6,890 sequences; 122,189,241 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq4919 235 1e-59 >seq4919 Length=2758 Score = 235 bits (260), Expect = 1e-59 Identities = 202/245 (82%), Gaps = 5/245 (2%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 ||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct 545 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 604 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | ||||||| | | |||| | |||||| | | |||||| ||||||||||| Sbjct 605 ATAACATGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGAGTAATGATTAA 661 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||| |||||||||| | |||||| ||||||||||||||||||||||||||| || Sbjct 662 GAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTACGGA 721 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| |||||||||| || |||||||| ||||||| |||| ||||||||||| Sbjct 722 AGACGAACATCTGCGAAAGCATTTGCCAAGGATACTTTCATTGATCA-AGAACGAAAGTT 780 Query 314 AGGGG 318 |||| Sbjct 781 GGGGG 785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915136942720