Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016-
04-26] 6,890 sequences; 122,189,241 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq4919 235 1e-59
>seq4919
Length=2758
Score = 235 bits (260), Expect = 1e-59
Identities = 202/245 (82%), Gaps = 5/245 (2%)
Strand=Plus/Plus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133
||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct 545 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 604
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
|||| | ||||||| | | |||| | |||||| | | |||||| |||||||||||
Sbjct 605 ATAACATGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGAGTAATGATTAA 661
Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253
|||| |||||||||| | |||||| ||||||||||||||||||||||||||| ||
Sbjct 662 GAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTACGGA 721
Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313
|||| ||| |||||||||| || |||||||| ||||||| |||| |||||||||||
Sbjct 722 AGACGAACATCTGCGAAAGCATTTGCCAAGGATACTTTCATTGATCA-AGAACGAAAGTT 780
Query 314 AGGGG 318
||||
Sbjct 781 GGGGG 785
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915136942720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |