Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016- 04-26] 6,890 sequences; 122,189,241 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq6283 86.0 6e-15 >seq6283 Length=1328 Score = 86.0 bits (94), Expect = 6e-15 Identities = 133/180 (74%), Gaps = 10/180 (6%) Strand=Plus/Minus Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGT-GATAAGCTGCGAAAAGCTAC 64 |||||||| ||||||| ||| ||| ||||||||| || |||| | |||| | ||| | Sbjct 683 ACGGTGGAGACCTAGGCACTCAGAGACGAAGAAGGGCGCAGATAC-CGGCGATACGCTTC 625 Query 65 GGGGAT-TGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATAT-T 122 ||||| ||||| | | | ||||||||| |||| |||||| |||||||| ||| | | Sbjct 624 GGGGAGCTGGCA-ACAAGCATTGATCCGGAGATTCCCGAATAGGGCAACCTCATAGAACT 566 Query 123 GGAGATATA--TCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 ||||| ||||| | |||| |||| ||| | ||||||||||||||||||| Sbjct 565 ACCTATATAATTCATA--GTTAGGTAAGAGGC-AACCCAGTGAACTGAAACATCTAAGTA 509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476768175090