Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016-
04-26] 6,890 sequences; 122,189,241 total letters
Query= AAMG01000370.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq6283 86.0 6e-15
>seq6283
Length=1328
Score = 86.0 bits (94), Expect = 6e-15
Identities = 133/180 (74%), Gaps = 10/180 (6%)
Strand=Plus/Minus
Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGT-GATAAGCTGCGAAAAGCTAC 64
|||||||| ||||||| ||| ||| ||||||||| || |||| | |||| | ||| |
Sbjct 683 ACGGTGGAGACCTAGGCACTCAGAGACGAAGAAGGGCGCAGATAC-CGGCGATACGCTTC 625
Query 65 GGGGAT-TGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATAT-T 122
||||| ||||| | | | ||||||||| |||| |||||| |||||||| ||| | |
Sbjct 624 GGGGAGCTGGCA-ACAAGCATTGATCCGGAGATTCCCGAATAGGGCAACCTCATAGAACT 566
Query 123 GGAGATATA--TCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180
||||| ||||| | |||| |||| ||| | |||||||||||||||||||
Sbjct 565 ACCTATATAATTCATA--GTTAGGTAAGAGGC-AACCCAGTGAACTGAAACATCTAAGTA 509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476768175090
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |