Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016-
04-26] 6,890 sequences; 122,189,241 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq5307 241 3e-61
>seq5307
Length=2176
Score = 241 bits (266), Expect = 3e-61
Identities = 251/328 (77%), Gaps = 1/328 (0%)
Strand=Plus/Minus
Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70
||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct 1311 GAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTG 1252
Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130
|||||| | |||||||||||||| | ||| || ||| | ||| |||| ||
Sbjct 1251 TCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCCCGTAAAGTCTAATGTCAAATACC 1192
Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGA-CTAGAGTGTGTCAGAGGGGGGT 189
||||| ||||| ||| ||||| | || |||| || |||| | ||||| |
Sbjct 1191 AGGGCTCAACCTTGGACCGGCATTGGAGAACTCACGGGCTTGAGTACGGTAGAGGCAGAG 1132
Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249
||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||
Sbjct 1131 GGAATTCCACGTGGAGCGGTGAAATGCGTAGAGATGTGGAGGAACACCAGTGGCGAAGGC 1072
Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309
| ||||| | |||||| || | |||||||| |||||| || |||||||||
Sbjct 1071 GCTCTGCTGGGCCGAGACTGACACTGAGAGACGAAAGCTGGGGGAGTGAATAGGATTAGA 1012
Query 310 TACCCTGGTAGTCCACGCCCTAAACGAT 337
|||||| ||| ||| || ||||| ||
Sbjct 1011 TACCCTAGTAATCCCAGCTGTAAACTAT 984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1289511146560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |