Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016-
04-26] 6,890 sequences; 122,189,241 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq4712 143 4e-32
>seq4712
Length=3135
Score = 143 bits (158), Expect = 4e-32
Identities = 181/248 (73%), Gaps = 17/248 (7%)
Strand=Plus/Plus
Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60
|||| |||||| ||| ||||||||||||| || ||| || | ||||| | ||| ||
Sbjct 1895 CTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATATATTGTCTTAC-GACTTTGCGG 1953
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120
||||||||||||| |||||||||||| | || || |||||||| ||
Sbjct 1954 AGACCTGTGTTTTTGGTAAACAGTCGCCTGAGCCTGGTCACTGCGACC----------CA 2003
Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180
| | || || | | ||| |||||||| ||||||||||||||||| ||||||||
Sbjct 2004 AGAAGTAAATC-----CTG-GGCGCCCCTTCTTCCGAAGTTACGGGGCCAGTTTGCCGAG 2057
Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240
||||||| | ||||| | || | |||| |||||||||||| | ||||||||||||
Sbjct 2058 TTCCTTAGAGAGAGTTCTCTCGCGCCCCTTGGTATTCTCTACCAACCTACCTGTGTCGGT 2117
Query 241 TTACGGTA 248
|| ||||
Sbjct 2118 TTCAGGTA 2125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694353650970
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |