Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016-
04-26] 6,890 sequences; 122,189,241 total letters
Query= AAMG01000567.1
Length=197
Score E
Sequences producing significant alignments: (Bits) Value
seq4712 78.8 1e-12
>seq4712
Length=3135
Score = 78.8 bits (86), Expect = 1e-12
Identities = 120/167 (72%), Gaps = 3/167 (2%)
Strand=Plus/Minus
Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83
|||| |||||| |||| ||| || |||| |||| || ||| ||| | | | ||||
Sbjct 2119 AAACCGACACAGGTAGGTTGGTAGAGAATACCAAGGGGCGCGAGAGAA-CTCTCTCTAAG 2061
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143
||||| ||||||||| ||| |||||||||| | || ||| || | | | ||
Sbjct 2060 GAACTCGGCAAACTGGCCCCGTAACTTCGGAAGAAGGGGCGCCCAGGATTTACTTCTTGG 2001
Query 144 G-CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| ||||| || ||| ||||| |||||||| |||||||||||| ||
Sbjct 2000 GTCGCAGTGACCAGGCTCAGGCGACTGTTTACCAAAAACACAGGTCT 1954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531164544060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |