Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016- 04-26] 6,890 sequences; 122,189,241 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq4712 78.8 1e-12 >seq4712 Length=3135 Score = 78.8 bits (86), Expect = 1e-12 Identities = 120/167 (72%), Gaps = 3/167 (2%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| |||| ||| || |||| |||| || ||| ||| | | | |||| Sbjct 2119 AAACCGACACAGGTAGGTTGGTAGAGAATACCAAGGGGCGCGAGAGAA-CTCTCTCTAAG 2061 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143 ||||| ||||||||| ||| |||||||||| | || ||| || | | | || Sbjct 2060 GAACTCGGCAAACTGGCCCCGTAACTTCGGAAGAAGGGGCGCCCAGGATTTACTTCTTGG 2001 Query 144 G-CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||||| || ||| ||||| |||||||| |||||||||||| || Sbjct 2000 GTCGCAGTGACCAGGCTCAGGCGACTGTTTACCAAAAACACAGGTCT 1954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531164544060