Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016-
04-26] 6,890 sequences; 122,189,241 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq4712 268 2e-69
>seq4712
Length=3135
Score = 268 bits (296), Expect = 2e-69
Identities = 309/414 (75%), Gaps = 23/414 (6%)
Strand=Plus/Plus
Query 13 GCATCTTCACAGCG-ATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGT 71
|||||||||| | | || ||||||| ||| ||| |||||||||| |||||
Sbjct 1712 GCATCTTCACGGGACAAGTCTATTTCACCGAGCCTCTCTCTGAGACAGCGCTCAGATCGT 1771
Query 72 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131
|||||| ||||||||||||| ||||||| |||||| ||||||||||||||||||| ||||
Sbjct 1772 TACGCCTTTCGTGCAGGTCGAAACTTACTCGACAATGAATTTCGCTACCTTAGGATCGTT 1831
Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA-GCTAACCCCA 190
|| |||||| |||||||| |||||||||||| || |||||| | | | |||||
Sbjct 1832 ATAGTTACGACCGCCGTTCACCGGGGCTTCGGTCGTCAGCTTCCCTCAACGGTAACCAAC 1891
Query 191 TCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGC 250
| ||||||||||||||| |||||||||||| ||| ||| | ||| || |||||
Sbjct 1892 TTCCTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATATATTGTCTTACGACTTTGC 1951
Query 251 AGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCT 310
||| |||||||||| ||||||||||| ||||||| || ||||| || ||
Sbjct 1952 GGAGACCTGTGTTTTTGGTAAACAGTCGCCTGAGCCTGGTCACTGCGACC--CAAGA--- 2006
Query 311 TACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTT 370
|| || |||| ||||| |||||| |||||||||||| ||| |||
Sbjct 2007 -----AGTAAATCCT----------GGGCGCCCCTTCTTCCGAAGTTACGGGGCCAGTTT 2051
Query 371 GCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACC 424
||| |||||||| |||||||||| || ||||||||||||||| ||||||
Sbjct 2052 GCCGAGTTCCTTAGAGAGAGTTCTCTCGCGCCCCTTGGTATTCTCTA-CCAACC 2104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260713130880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |