Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016- 04-26] 6,890 sequences; 122,189,241 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq4712 298 1e-78 >seq4712 Length=3135 Score = 298 bits (330), Expect = 1e-78 Identities = 288/366 (79%), Gaps = 9/366 (2%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTA--CAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64 |||||||||| |||| | | ||||||||||| || | |||||||| || || |||| Sbjct 1712 GCATCTTCAC-GGGACAAGTCTATTTCACCGAGCCTCTCTCTGAGACAGCGCTCAGATCG 1770 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 ||||||||||||||| ||||| ||||||| |||||| ||||||||||||||||||| ||| Sbjct 1771 TTACGCCTTTCGTGCAGGTCGAAACTTACTCGACAATGAATTTCGCTACCTTAGGATCGT 1830 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTCTAACAGA 183 |||||||||| |||||||| || ||||||| || | ||||| | | |||| | Sbjct 1831 TATAGTTACGACCGCCGTTCACCGGGGCTTCGGTCGTCAGCTTCCCTCAACGGTAACCAA 1890 Query 184 TCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAG 243 |||||||||||| |||| |||||||||||||| || ||| || ||||| |||||| | Sbjct 1891 CTTCCTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATATATTGTCTTACGACTTTG 1950 Query 244 CAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC-----TGTC 298 | || ||||||||||||||||||||||||| || |||| || ||||| || || Sbjct 1951 CGGAGACCTGTGTTTTTGGTAAACAGTCGCCTGAGCCTGGTCACTGCGACCCAAGAAGTA 2010 Query 299 ATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATA 358 | ||| |||||||| || ||||||||||| || |||||||||||||||| | | Sbjct 2011 AATCCTGGGCGCCCCTTCTTCCGAAGTTACGGGGCCAGTTTGCCGAGTTCCTTAGAGAGA 2070 Query 359 GTTCTC 364 |||||| Sbjct 2071 GTTCTC 2076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062326800640