Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016- 04-26] 6,890 sequences; 122,189,241 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq5307 331 3e-88 >seq5307 Length=2176 Score = 331 bits (366), Expect = 3e-88 Identities = 375/493 (76%), Gaps = 10/493 (2%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct 915 CGCAAGAGTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATTATGTGGAT 856 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT-CCTCTGACCCCTCTAGAG 125 |||||||| ||||||||||||||||||||| ||||||| | |||| || ||| Sbjct 855 TAATTCGATGCAACGCGAAGAACCTTACCAGGGTTTGACATGTCAAGGACCTTTC-AGAA 797 Query 126 ATAG-AGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCG 184 || | ||| | ||| |||| | || ||||||| ||||||| ||||||||||||| Sbjct 796 ATGGAAGGGTGCCCTAACGGGAGCTTGA-ACACAGGTGGTGCATGGCTGTCGTCAGCTCG 738 Query 185 TGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATC 244 || |||||| ||| ||||||||||| ||||||||||||||| ||||||| | Sbjct 737 TGCCGTGAGGTGTATGGTTAAGTCCCATAACGAGCGCAACCCTCGTCTTTAGTTG--TTG 680 Query 245 ATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACG 304 ||| | | ||||| ||||||| ||| || | ||||||||||| ||| |||| Sbjct 679 ATTTA--TCAATTCTCTAGAGAGACTGCCAGTG-TAAGCTGGAGGAAGGTGAGGATGACG 623 Query 305 TCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAG 364 |||| ||| ||||||||||| |||||| ||||||| |||||||| |||| Sbjct 622 TCAAGTCAGCATGCCCCTTACACCCTGGGCTTCACACGTAATACAATGGTTGGGACAATC 563 Query 365 GGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGT 424 | ||||| |||||| | ||| ||| |||| ||||||||||||||||| Sbjct 562 AGAAGCGATCTCGCGAGAGCTAGCGGATCTGTTAAACCCAACCTCAGTTCGGATTGTAGG 503 Query 425 CTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-ATGCTACGGT 483 |||||||||| ||| ||||||| ||||||||||||||||| ||||| || |||| Sbjct 502 CTGCAACTCGCCTACATGAAGCCGGAATCGCTAGTAATCGCCAGTCAGCTATATGGCGGT 443 Query 484 GAATACGTTCCCG 496 ||||||||||||| Sbjct 442 GAATACGTTCCCG 430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503896374400