Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016-
04-26] 6,890 sequences; 122,189,241 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq4712 194 3e-47
>seq4712
Length=3135
Score = 194 bits (214), Expect = 3e-47
Identities = 179/227 (79%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172
|||||| |||| ||||||||| ||||||| ||||| ||| |||||||||| |
Sbjct 1523 GACAGTTTCAGGTGGGCAGTTTATTTGGGGCGAATACCTCCTAAAAGGTAACGGAGGTGT 1464
Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTT 232
||||| | ||||||| |||| ||||| || | |||| ||||||||||||| | |
Sbjct 1463 GCAAAGGTTCCCTCAGTCTGGACGGAAATCAGACATTGAGTGTAAAGGCAAAAGGGAGCT 1404
Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292
||||||| | ||| |||||| ||||||| |||||| ||| |||| ||||||| ||||||
Sbjct 1403 TGACTGCAAGACCTACAAGTCGAGCAGGGGCGAAAGCCGGCCTTAGTGATCCGACGGTGC 1344
Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|| ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 1343 CGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 1297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 982332312640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |