Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016-
04-26] 6,890 sequences; 122,189,241 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq6283 172 1e-40
seq4919 78.8 2e-12
>seq6283
Length=1328
Score = 172 bits (190), Expect = 1e-40
Identities = 183/235 (78%), Gaps = 5/235 (2%)
Strand=Plus/Plus
Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246
||||||| ||||||||| | | |||| | ||| ||| |||| ||||| | || | |
Sbjct 11 TGCCACTTCCTATAAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCACA-AGCATACT 69
Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306
| |||||||||||||| ||||||||||||| | |||||||||||||| | | ||||
Sbjct 70 TG-CTCCCACTGCTTGTCAGCATACGGTTTCATGTTCTATTTCACTCCC-TAACAAGGGT 127
Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366
||||||| |||||||||| ||||||| ||| |||||||||| |||| ||||||||||||
Sbjct 128 TCTTTTCACCTTTCCCTCGTGGTACTATTTCGCTATCGGTCACTCAGGAGTATTTAGCCT 187
Query 367 T-GGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
| |||| |||||| | | ||||| || |||| |||| || | |||||||
Sbjct 188 TACGAGG-TGGTCCTCGCTGATTCACACGGGATTTCACGTGTCCCATGCTACTCG 241
>seq4919
Length=2758
Score = 78.8 bits (86), Expect = 2e-12
Identities = 57/66 (86%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| | ||||||||
Sbjct 2598 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAATATTTAGC 2539
Query 365 CTTGGA 370
||| ||
Sbjct 2538 CTTAGA 2533
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241514453760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |