Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016-
04-26] 6,890 sequences; 122,189,241 total letters
Query= AAMG01001432.1
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
seq5307 214 4e-53
>seq5307
Length=2176
Score = 214 bits (236), Expect = 4e-53
Identities = 231/306 (75%), Gaps = 14/306 (5%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| ||||||| |||| ||||||||| || || || ||||||||||||||||||
Sbjct 1381 GGCATTGCTTCATCAGGCTTTCGCCCATTGTGAAAAATTCCTCACTGCTGCCTCCCGTAG 1440
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||||||||||||||||||||| |||||| | ||| |||||||| || ||||| |||
Sbjct 1441 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACTGAT 1500
Query 121 CGTCGGCTTGGTGGGCTATTA-TCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTC 179
||| | ||||| ||| ||| | ||||||||| |||||| | ||| ||||| ||| |
Sbjct 1501 CGTGGCCTTGGGAGGCCGTTACCCCCACCAACTAGCTAATCAGACGCAAGCCCCTCTACC 1560
Query 180 AGCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239
||| | | || | | | ||||| | |||||| |||||||||
Sbjct 1561 GGCGGTTATTC------------ACCTTTCACTCCTCAGCTATTATGGGGTATTAGCAAC 1608
Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299
|||||| | ||||| || ||| || ||| ||||| || ||| ||||| ||||||| ||
Sbjct 1609 AGTTTCCCGATGTTATCCCCCTCCGATAGGTAGGTT-CTTACGCGTTACGCACCCGTGCG 1667
Query 300 CCACTA 305
||||||
Sbjct 1668 CCACTA 1673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 998331210240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |