Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016-
04-26] 6,890 sequences; 122,189,241 total letters
Query= AAMG01001752.1
Length=400
Score E
Sequences producing significant alignments: (Bits) Value
seq4712 205 2e-50
>seq4712
Length=3135
Score = 205 bits (226), Expect = 2e-50
Identities = 284/392 (72%), Gaps = 13/392 (3%)
Strand=Plus/Plus
Query 16 GCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTGGAACCCTTGGAT 75
|||| |||||||| || |||| |||| ||| ||| | ||||||||| | |
Sbjct 2376 GCCTAGCCTTAGGTCCTGACTAACCCCCCATGGACGAACCTAGTGGAGGAACCCTTAGGT 2435
Query 76 AATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCTGCATTCTCACTCGCA 134
|||| | | |||||| |||| | || |||||| ||| |||||||||| |
Sbjct 2436 TTTCGGGGCATTGGATTCTCACCAATGTTTTCGTTACTCAAGCCAACATTCTCACTTCCG 2495
Query 135 TCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACG--ACGCTCCCCTACCC 192
| |||| | | || | || | | ||||||| || ||| |||||||||||||
Sbjct 2496 TACCGTCCATCCC-CACTTACGTGAAAACTTCACCCGAGA-ACGGAACGCTCCCCTACCT 2553
Query 193 A------ACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATC 246
| | | | | | ||||||||||||| | | ||||| ||| || |||||||
Sbjct 2554 ATAATTTATAATAAAATATACCACAGCTTCGGCAGGTCACTTAGTCCCGGC--CATTATC 2611
Query 247 GGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAA 306
||||| | | ||| ||||||||||||||||||||||||| |||||| |||||||| ||
Sbjct 2612 GGCGCAAGAACGCTTTACCAGTGAGCTATTACGCACTCTTTTAAGGATAGCTGCTTCTAA 2671
Query 307 GCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGG 366
|| ||| |||||||||| | ||| |||||||||| ||||| ||| |||| ||||||
Sbjct 2672 GCGAACTTCCTGGTTGTTTCAGCATTCTCACATCCTTTTCCACTTAGTGACCATTTAGGG 2731
Query 367 GCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398
|||||||||| || ||||||||||||||||||
Sbjct 2732 GCCTTAGCTGGTGGTCTGGGCTGTTTCCCTCT 2763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1177518863360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |