Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016- 04-26] 6,890 sequences; 122,189,241 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq4712 205 2e-50 >seq4712 Length=3135 Score = 205 bits (226), Expect = 2e-50 Identities = 284/392 (72%), Gaps = 13/392 (3%) Strand=Plus/Plus Query 16 GCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTGGAACCCTTGGAT 75 |||| |||||||| || |||| |||| ||| ||| | ||||||||| | | Sbjct 2376 GCCTAGCCTTAGGTCCTGACTAACCCCCCATGGACGAACCTAGTGGAGGAACCCTTAGGT 2435 Query 76 AATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCTGCATTCTCACTCGCA 134 |||| | | |||||| |||| | || |||||| ||| |||||||||| | Sbjct 2436 TTTCGGGGCATTGGATTCTCACCAATGTTTTCGTTACTCAAGCCAACATTCTCACTTCCG 2495 Query 135 TCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACG--ACGCTCCCCTACCC 192 | |||| | | || | || | | ||||||| || ||| ||||||||||||| Sbjct 2496 TACCGTCCATCCC-CACTTACGTGAAAACTTCACCCGAGA-ACGGAACGCTCCCCTACCT 2553 Query 193 A------ACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATC 246 | | | | | | ||||||||||||| | | ||||| ||| || ||||||| Sbjct 2554 ATAATTTATAATAAAATATACCACAGCTTCGGCAGGTCACTTAGTCCCGGC--CATTATC 2611 Query 247 GGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAA 306 ||||| | | ||| ||||||||||||||||||||||||| |||||| |||||||| || Sbjct 2612 GGCGCAAGAACGCTTTACCAGTGAGCTATTACGCACTCTTTTAAGGATAGCTGCTTCTAA 2671 Query 307 GCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGG 366 || ||| |||||||||| | ||| |||||||||| ||||| ||| |||| |||||| Sbjct 2672 GCGAACTTCCTGGTTGTTTCAGCATTCTCACATCCTTTTCCACTTAGTGACCATTTAGGG 2731 Query 367 GCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 |||||||||| || |||||||||||||||||| Sbjct 2732 GCCTTAGCTGGTGGTCTGGGCTGTTTCCCTCT 2763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177518863360