Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016- 04-26] 6,890 sequences; 122,189,241 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq5307 82.4 6e-14 >seq5307 Length=2176 Score = 82.4 bits (90), Expect = 6e-14 Identities = 111/154 (72%), Gaps = 8/154 (5%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| |||||||||| ||| | | ||| ||| ||| | |||||| Sbjct 493 CGAGTTGCAGCCTACAATCCGAACTGAGGTTGGGTTTAACAGATCCGCTAGCTCTCGCGA 552 Query 62 GTTGGCGGCCCTCTGTATGT----ACCATTGTATGACGTGTGAAGCCCTACCCATAAGGG 117 | | || |||| ||| |||||||||| ||||||||||||| |||||| Sbjct 553 GATCGCT----TCTGATTGTCCCAACCATTGTATTACGTGTGAAGCCCAGGGTGTAAGGG 608 Query 118 CCATGAGGACTTGACGTCATCCCCACCTTCCTCC 151 |||| ||||||||||||||| ||||||||||| Sbjct 609 GCATGCTGACTTGACGTCATCCTCACCTTCCTCC 642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415972233300