Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016-
04-26] 6,890 sequences; 122,189,241 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq5307 205 2e-50
>seq5307
Length=2176
Score = 205 bits (226), Expect = 2e-50
Identities = 219/284 (77%), Gaps = 4/284 (1%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||| ||||||| ||||| |||||| | | |||||| ||||||||||||||||||
Sbjct 1030 CCCA-GCTTTCGTCTCTCAGTGTCAGTCTCGGCCCAGCAGAGCGCCTTCGCCACTGGTGT 1088
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||||| || |||||||||||||||||| ||| |||||||| ||||||| | | ||
Sbjct 1089 TCCTCCACATCTCTACGCATTTCACCGCTCCACGTGGAATTCCCTCTGCCTCTACCGTAC 1148
Query 121 TCAAGAAAAACAGTT-TCAAATGCAGGCTATGGGTTGAGCCCATAGT-TTTCACATCTGA 178
||||| |||| || ||||| || |||||||||| | || ||| |||| ||
Sbjct 1149 TCAAGCCCGTGAGTTCTCCAATGCCGGTCCAAGGTTGAGCCC-TGGTATTTGACATTAGA 1207
Query 179 CTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTA 238
||| | || |||||| | |||||| |||||| | |||||| ||||||||| |||
Sbjct 1208 CTTTACGGGCCACCTACAGACGCTTTACGCCCAATCATTCCGGACAACGCTTGCACCCTC 1267
Query 239 CGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
|||||||||||||||||||||| ||||||||| ||||||||
Sbjct 1268 TGTATTACCGCGGCTGCTGGCACAGAGTTAGCCGGTGCTTATTC 1311
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 828744680190
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |