Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016-
04-26] 6,890 sequences; 122,189,241 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq4712 123 4e-26
>seq4712
Length=3135
Score = 123 bits (136), Expect = 4e-26
Identities = 83/93 (89%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242
||||| |||||||||||| ||| || ||||||||||||||||||||||||||| ||||||
Sbjct 1154 ACGTTTTGAACCCAGCTCACGTACCACTTTAATGGGCGAACAGCCCAACCCTTCGGACCT 1213
Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
||| ||| || |||||| || ||||||||||||
Sbjct 1214 ACTACAGACCGAGGATGTGATGAGCCGACATCG 1246
Score = 96.9 bits (106), Expect = 5e-18
Identities = 128/175 (73%), Gaps = 2/175 (1%)
Strand=Plus/Plus
Query 9 GCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCA 68
||||| ||||||||| |||||| ||||| | ||| | ||||| |||||| | |
Sbjct 23 GCTTCCTACTTAGATGCTTTCAGCAGTTATCTAT-CCATGCGTAGCTACCCAGCGTTTCC 81
Query 69 C-TTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGA 127
| |||| | | ||||||| ||| | || ||||| | | ||||||||||||||| | |
Sbjct 82 CATTGGAATGAGAACTGGTACACAATTGGCATGTCCTTTCAGGTCCTCTCGTACTATGAA 141
Query 128 CAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182
||| ||||||| || ||||| || |||||| ||||| ||||||||| ||
Sbjct 142 AGGCTACTCTCAATGCTCTAACGCCTACACCGGATATGGACCAAACTGTCTCACG 196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 780747884040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |