Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016-
04-26] 6,890 sequences; 122,189,241 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq5307 269 6e-70
>seq5307
Length=2176
Score = 269 bits (298), Expect = 6e-70
Identities = 299/397 (75%), Gaps = 10/397 (3%)
Strand=Plus/Minus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
|||| |||||||||| |||||||||||||||||||||| |||| || |||||| ||||
Sbjct 1307 AAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTGTCCG 1248
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132
|||| | ||||||||||| || |||||||| | ||||| | || ||| | | ||
Sbjct 1247 GAATGATTGGGCGTAAAGCGTCTGTAGGTGGCCCGTAAAGTCTAATGTCAAATACCAGGG 1188
Query 133 CTCAACCCCGGGACTGCTTTTGA-AACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAA 191
||||||| || | || || || |||| ||||| |||| | | || |||| ||||
Sbjct 1187 CTCAACCTTGGACCGGCATTGGAGAACTCACGGGCTTGAGTACGGTAGAGGCAGAGGGAA 1128
Query 192 TTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCT 251
|||| ||| |||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 1127 TTCCACGTGGAGCGGTGAAATGCGTAGAGATGTGGAGGAACACCAGTGGCGAAGGCGCTC 1068
Query 252 TGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACC 311
|||||| | | |||||||||||| ||||||| |||||| || |||||||||||||
Sbjct 1067 TGCTGGGCCGAGACTGACACTGAGAGACGAAAGCTGGGGGAGTGAATAGGATTAGATACC 1008
Query 312 CTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTG 371
|| ||| ||| || |||||| ||| | |||| || || | | | | || ||
Sbjct 1007 CTAGTAATCCCAGCTGTAAACTATGGAGACTAAGT----GGTCCCTTTGGGGC-----TG 957
Query 372 CCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | ||| ||||| ||||| | || |||||||||||
Sbjct 956 CTGTAGCTAACGCGTTAAGTCTCCCGCCTGGGGAGTA 920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203117099520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |