Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016- 04-26] 6,890 sequences; 122,189,241 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq6283 118 2e-24 >seq6283 Length=1328 Score = 118 bits (130), Expect = 2e-24 Identities = 174/243 (72%), Gaps = 9/243 (4%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 |||||| ||| ||| | | || ||| ||||| || || | |||||| ||| |||| Sbjct 681 GGTGGAGACCTAGGCACTCAGAGACGAAGAAGGGCGCAGATACCGGCGATACGCTTCGGG 622 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 ||| |||| || | |||||||| ||||| |||||| ||| |||| | | | Sbjct 621 GAGCTGGCAA-CAAGCATTGATCCGGAGATTCCCGAATAGGGCAACCT----CATAGA-- 569 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | | | | ||| ||||| || | || || ||| | | |||||||||||||||||| Sbjct 568 -ACTACCTATATAATTCATAGTTAGGTAAGAGGCAACCCAGTGAACTGAAACATCTAAGT 510 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||||| ||||| ||||| ||| || ||||||| ||||| |||||||||| |||| || Sbjct 509 AGCTGGAGGAATAGAAAGCAAACGCGATTCCCGTAGTAGCGGCGAGCGAACCGGGAACAG 450 Query 249 CCT 251 ||| Sbjct 449 CCT 447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918336722240