Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016-
04-26] 6,890 sequences; 122,189,241 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq6283 118 2e-24
>seq6283
Length=1328
Score = 118 bits (130), Expect = 2e-24
Identities = 174/243 (72%), Gaps = 9/243 (4%)
Strand=Plus/Minus
Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69
|||||| ||| ||| | | || ||| ||||| || || | |||||| ||| ||||
Sbjct 681 GGTGGAGACCTAGGCACTCAGAGACGAAGAAGGGCGCAGATACCGGCGATACGCTTCGGG 622
Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129
||| |||| || | |||||||| ||||| |||||| ||| |||| | | |
Sbjct 621 GAGCTGGCAA-CAAGCATTGATCCGGAGATTCCCGAATAGGGCAACCT----CATAGA-- 569
Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188
| | | | ||| ||||| || | || || ||| | | ||||||||||||||||||
Sbjct 568 -ACTACCTATATAATTCATAGTTAGGTAAGAGGCAACCCAGTGAACTGAAACATCTAAGT 510
Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248
||||| ||||| ||||| ||| || ||||||| ||||| |||||||||| |||| ||
Sbjct 509 AGCTGGAGGAATAGAAAGCAAACGCGATTCCCGTAGTAGCGGCGAGCGAACCGGGAACAG 450
Query 249 CCT 251
|||
Sbjct 449 CCT 447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 918336722240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |