Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016- 04-26] 6,890 sequences; 122,189,241 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq5648 334 2e-89 seq2554 123 8e-26 >seq5648 Length=1799 Score = 334 bits (370), Expect = 2e-89 Identities = 190/192 (99%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 349 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1799 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 1740 Query 409 ATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCC 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1739 ATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCC 1680 Query 469 GCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGT 528 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1679 GCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGT 1620 Query 529 CAACATCACTTT 540 ||||||| |||| Sbjct 1619 CAACATC-CTTT 1609 >seq2554 Length=12034 Score = 123 bits (136), Expect = 8e-26 Identities = 68/68 (100%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 349 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12034 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 11975 Query 409 ATTAGATG 416 |||||||| Sbjct 11974 ATTAGATG 11967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635087334720