Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016-
04-26] 6,890 sequences; 122,189,241 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq5648 334 2e-89
seq2554 123 8e-26
>seq5648
Length=1799
Score = 334 bits (370), Expect = 2e-89
Identities = 190/192 (99%), Gaps = 1/192 (1%)
Strand=Plus/Minus
Query 349 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1799 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 1740
Query 409 ATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCC 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1739 ATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCC 1680
Query 469 GCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGT 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1679 GCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGT 1620
Query 529 CAACATCACTTT 540
||||||| ||||
Sbjct 1619 CAACATC-CTTT 1609
>seq2554
Length=12034
Score = 123 bits (136), Expect = 8e-26
Identities = 68/68 (100%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 349 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 12034 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 11975
Query 409 ATTAGATG 416
||||||||
Sbjct 11974 ATTAGATG 11967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635087334720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |