Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016-
04-26] 6,890 sequences; 122,189,241 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq4712 233 7e-59
>seq4712
Length=3135
Score = 233 bits (258), Expect = 7e-59
Identities = 400/565 (71%), Gaps = 29/565 (5%)
Strand=Plus/Plus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
|||||||||| |||| |||||||||||||||| ||| ||||||||| |||||| ||
Sbjct 1381 TCGACTTGTAGGTCTTGCAGTCAAGCTCCCTTTTGCCTTTACACTCAATGTCTGATTTCC 1440
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
|||| ||||||||||||||| | |||||||||| |||| ||||| | |||||||
Sbjct 1441 GTCCAGACTGAGGGAACCTTTGCACACCTCCGTTACCTTTTAGGAGGT-ATTCGCCCCAA 1499
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGAT-CATGGGCCAAGGTTAGATATCCA 179
|||||| |||||| | |||||| || ||| || || | |||| || |
Sbjct 1500 ATAAACTGCCCACCTGAAACTGTCAAGGGTCCTGATTCAAGGATCCCCATTAGGATTCTA 1559
Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCG-----CAT 234
| ||||||||| | ||| | | ||||| |||| | || | | |
Sbjct 1560 GCTCTTCCAGAGTGGTCTCTCACTGATGGCTCCA-----ACTACCCCGGAAGGTAATCTT 1614
Query 235 CATAGTCTCCCACCTATCCTACACAA--ACCGCACCGAATGCCAATACCAAGCTATAGTG 292
|| | |||||||||| || | ||| | || ||||| ||||| ||||| || |||
Sbjct 1615 CAACGCCTCCCACCTAGGCTGCGCAAGAAAAGC-CCGAAC-CCAATTCCAAGATACAGTC 1672
Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTG-CA 350
||| | | |||||||| |||| | | | | ||||||| || | | |
Sbjct 1673 AAGCTTCATAGGGTCTTTCTGTCCAGGTGTAGGTAGTCCGCATCTTCACGGGACAAGTCT 1732
Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCG 409
||||||||| |||| | ||||||||| | || |||||||||| |||||||||||||
Sbjct 1733 ATTTCACCGAGCCTCTCTCTGAGACAGC-GCTCAGATCGTTACGCCTTTCGTGCAGGTCG 1791
Query 410 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469
||||||| |||||| |||||||||||||||||||| ||||||||||| ||||||||| |
Sbjct 1792 AAACTTACTCGACAATGAATTTCGCTACCTTAGGATCGTTATAGTTACGACCGCCGTTCA 1851
Query 470 CTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCT 529
| |||||||| | | || || | || ||| || || | | | ||||||||
Sbjct 1852 CCGGGGCTTCGGTCGTCAGCTTCCCTCA--ACG----GTAACCA--ACTTC-CTTAACCT 1902
Query 530 TCCAGCACCGGGCAGGCGTCAGTCC 554
||| |||| ||||||||||||| ||
Sbjct 1903 TCCGGCACTGGGCAGGCGTCAGCCC 1927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1702282704640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |