Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq153 129 3e-28 seq150 129 3e-28 seq135 129 3e-28 seq133 129 3e-28 seq132 129 3e-28 seq131 129 3e-28 seq48 129 3e-28 seq47 129 3e-28 seq46 129 3e-28 seq45 129 3e-28 seq44 129 3e-28 seq43 129 3e-28 >seq153 Length=26000 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA-AAATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 11391 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 11449 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 11450 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 11507 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA-AAATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 21064 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 21122 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 21123 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 21180 Score = 122 bits (134), Expect = 5e-26 Identities = 100/118 (85%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 1724 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 1782 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||| |||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 1783 CGATCC-TAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 1839 >seq150 Length=18504 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 9472 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 9414 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 9413 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 9356 >seq135 Length=11379 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 1849 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 1791 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 1790 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 1733 >seq133 Length=496414 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 493156 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 493098 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 493097 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 493040 >seq132 Length=16748 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 3525 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 3467 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 3466 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 3409 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 6845 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 6787 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 6786 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 6729 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 16511 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 16453 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 16452 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 16395 >seq131 Length=14598 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 3680 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 3622 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 3621 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 3564 >seq48 Length=14181 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 12378 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 12320 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 12319 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 12262 >seq47 Length=30587 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 179 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 121 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 120 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 63 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 9854 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 9796 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 9795 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 9738 Score = 123 bits (136), Expect = 1e-26 Identities = 101/119 (85%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTT-GATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGC 58 ||||||||| ||||| |||||||| |||||||||| |||||| | || |||||| Sbjct 30327 GAACCCAAAAACTTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCG 30269 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 30268 CCGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 30210 >seq46 Length=41367 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 5707 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 5649 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 5648 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 5591 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 15382 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 15324 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 15323 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 15266 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 25056 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 24998 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 24997 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 24940 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 34728 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 34670 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 34669 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 34612 >seq45 Length=21540 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 9298 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 9240 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 9239 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 9182 Score = 122 bits (134), Expect = 5e-26 Identities = 100/118 (85%), Gaps = 3/118 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 18969 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 18911 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| ||| |||||| ||||||||||| Sbjct 18910 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGAC-GTATCTAATCGTCTTCGA 18854 >seq44 Length=10074 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 367 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 309 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 308 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 251 >seq43 Length=39912 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 9296 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 9238 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 9237 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 9180 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 24390 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 24332 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 24331 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 24274 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 34026 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 33968 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 33967 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 33910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399582400