Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq148 96.9 3e-18 seq149 86.0 6e-15 >seq148 Length=122497 Score = 96.9 bits (106), Expect = 3e-18 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| |||||||||||| |||||||||| ||| ||||| || Sbjct 51519 GGTCGCAGTGACCAGGCCCTGGCGACTGTTTATCAAAAACACAGGTCTCCGCAAAGTCGT 51578 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| || ||| ||| |||||||||||| ||||||||||||||| Sbjct 51579 AAGACAACATATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 51624 >seq149 Length=72121 Score = 86.0 bits (94), Expect = 6e-15 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || |||||||||||| ||| Sbjct 13302 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTGGTAACACGACGTATAGGGTCTGA 13361 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||||||||||| |||| |||| Sbjct 13362 CACCTGCCCGGTGCTGGAAACTTAA 13386 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/85 (81%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||| | ||||||||||| ||||||| || | || |||||||||||| ||| Sbjct 69917 GCGACTGTT-ACTAAAAACACAGGACTCTGCTAAGTGGTAACACGACGTATAGGGTCTGA 69975 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||||||||||| |||| |||| Sbjct 69976 CACCTGCCCGGTGCTGGAAACTTAA 70000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476799260960