Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq148 338 1e-90 seq149 140 7e-31 >seq148 Length=122497 Score = 338 bits (374), Expect = 1e-90 Identities = 291/356 (82%), Gaps = 12/356 (3%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | |||||||||||| |||||| Sbjct 51807 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCTGATCGTT 51748 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 51747 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 51688 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGT--TCA-CTGCTTCGATTGCTCTAACAGA 183 ||||||||||||||||| || ||||||| ||| ||| || |||| | |||| | Sbjct 51687 TAGTTACGGCCGCCGTTCACCGGGGCTTCAGTCGTCAGCTTCTTCAA--AGAATAACCAA 51630 Query 184 TCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAG 243 | |||||||||| |||| |||||||||||||| || ||| | ||||| |||||| | Sbjct 51629 CTTCTTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATATGTTGTCTTACGACTTTG 51570 Query 244 CAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC------TGT 297 | || ||||||||||||| ||||||||||| |||||| || ||||| || | | Sbjct 51569 CGGAGACCTGTGTTTTTGATAAACAGTCGCCAGGGCCTGGTCACTGCGACCAAGCAATTT 51510 Query 298 CATAGAC-AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | || ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 51509 AAGTTACTTGGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 51454 >seq149 Length=72121 Score = 140 bits (154), Expect = 7e-31 Identities = 191/266 (72%), Gaps = 22/266 (8%) Strand=Plus/Minus Query 112 ACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT 171 ||||||||||||| | ||||||||||||||||||||||| ||| || | ||||| || Sbjct 13477 ACCTTAGGACCGTCAGAGTTACGGCCGCCGTTTACTGGGCCTTGCATTTAGAGCTTCCAT 13418 Query 172 TGC-------TCTAACAGATCCCC-------TTAACCTTCCAGCACCGGGCAGGCGTCAG 217 | ||| | || | || |||| ||||||||||||||||| ||||| Sbjct 13417 TAAGATGGTGTCTTAATGAGCACCCCTCCTGTTAAGTTTCCAGCACCGGGCAGGTGTCAG 13358 Query 218 CTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGG 277 ||||||| |||| || | |||||||||| ||||||||||| |||||||||||| Sbjct 13357 ACCCTATACGTCGTGTTACCACTTAGCAGAGTCCTGTGTTTTTAGTAAACAGTCGCCACC 13298 Query 278 GCCTATTCTCTGC-----GGCCTGTCATAGA--CAGGCACCCCTTCTCCCTAAGTTACGG 330 ||| || | ||| || | | |||| || | | |||| | || ||||||||| Sbjct 13297 CCCTCTTTTGTGCCACATGGGTTTTTTTAGACCCATGTCCTCCTTTTTCCGAAGTTACGG 13238 Query 331 GGTCATTTTGCCGAGTTCCTT-AACA 355 | | ||||||||||||||| |||| Sbjct 13237 AGGTAATTTGCCGAGTTCCTTCAACA 13212 Score = 132 bits (146), Expect = 1e-28 Identities = 190/265 (72%), Gaps = 22/265 (8%) Strand=Plus/Minus Query 112 ACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT 171 ||||||||||||| | ||||||||||||||||||||||| ||| || | ||||| || Sbjct 70091 ACCTTAGGACCGTCAGAGTTACGGCCGCCGTTTACTGGGCCTTGCATTTAGAGCTTCCAT 70032 Query 172 TGC-------TCTAACAGATCCCC-------TTAACCTTCCAGCACCGGGCAGGCGTCAG 217 | ||| | || | || |||| ||||||||||||||||| ||||| Sbjct 70031 TAAGATGGTGTCTTAATGAGCACCCCTCCTGTTAAGTTTCCAGCACCGGGCAGGTGTCAG 69972 Query 218 CTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGG 277 ||||||| |||| || | |||||||||| ||||||||||| || ||||||||| Sbjct 69971 ACCCTATACGTCGTGTTACCACTTAGCAGAGTCCTGTGTTTTTAGT-AACAGTCGCCACC 69913 Query 278 GCCTATTCTCTGCGGCCTG----TCATAGA--CAGGCACCCCTTCTCCCTAAGTTACGGG 331 ||| || | ||| | || | |||| || | | |||| | || ||||||||| Sbjct 69912 CCCTCTTTTGTGCCACATGGGTTTTTTAGACCCATGTCCTCCTTTTTCCGAAGTTACGGA 69853 Query 332 GTCATTTTGCCGAGTTCCTT-AACA 355 | | ||||||||||||||| |||| Sbjct 69852 GGTAATTTGCCGAGTTCCTTCAACA 69828 Score = 95.1 bits (104), Expect = 3e-17 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||||| ||| || | ||||||| | || |||| Sbjct 14305 GCATCTTCACGGAGAATTCAATTTCACTGAGATCATGTTGGAGACAGCGGGGAAGTCGTG 14246 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCT 111 || || ||| ||| ||||||||||||||||||||||||||||||| Sbjct 14245 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCT 14201 Score = 91.5 bits (100), Expect = 3e-16 Identities = 84/105 (80%), Gaps = 1/105 (1%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||||| ||| || | ||||||| | || |||| Sbjct 70909 GCATCTTCACGGAGAATTCAATTTCACTGAGATCATGTTGGAGACAGCGGGGAAGTCGTG 70850 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCT 111 || || ||| ||| ||||||||||||||||||||||||||||||| Sbjct 70849 ACACCATTC-TGCAGGTCGGAACTTACCCGACAAGGAATTTCGCT 70806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062398300160