Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq148 212 1e-52 seq149 134 3e-29 >seq148 Length=122497 Score = 212 bits (234), Expect = 1e-52 Identities = 183/227 (81%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172 |||||| |||| |||||||||||||||||||||| ||||| ||| |||||||||| | Sbjct 51996 GACAGTTTCAGGTGGGCAGTTTGACTGGGGCGGTCACCTCCTAAAAGGTAACGGAGGTGT 52055 Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTT 232 ||||| | ||||||| |||| ||||| || || | |||| ||||||| ||||| | | Sbjct 52056 GCAAAGGTTCCCTCAGGCTGGACGGAAATCAGCCGGAGAGTGTAAAGGCAGAAGGGAGCT 52115 Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292 ||||||| | ||| |||||| ||||||| |||||| ||| |||| ||||||| |||| | Sbjct 52116 TGACTGCAAGACCTACAAGTCGAGCAGGGGCGAAAGCCGGCCTTAGTGATCCGACGGTTC 52175 Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 52176 CATGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 52222 >seq149 Length=72121 Score = 134 bits (148), Expect = 3e-29 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||| |||||||||||||||||||| ||| ||||||||||||| | | | ||| || || Sbjct 14541 GGGTAGTTTGACTGGGGCGGTCGCTTCCTAAAGAGTAACGGAAGTGTGCGAAGGTAAGCT 14600 Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 || |||| ||||| || | | || | || || ||||| || |||||| || || Sbjct 14601 CAAGCTGGACGGAAATCAGCTGGAGAGCGTAATGGTAAAAGCTTGCCTGACTGTGAGACT 14660 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305 |||||| | ||| |||||||||||| | || ||| |||| || || ||||| ||| Sbjct 14661 TACAAGTCGAACAGAGACGAAAGTCGGCCATAGTGACCCGGGAGTTCTTGGTGGAAAGGC 14720 Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| || |||||| |||| ||| || |||||| Sbjct 14721 TCTCGATCAACGGATCAAAGGTACGCTAGGGATA 14754 Score = 123 bits (136), Expect = 5e-26 Identities = 158/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||| |||||||||||||||||||| ||| ||||||||||||| | | | ||| || || Sbjct 71143 GGGTAGTTTGACTGGGGCGGTCGCTTCCTAAAGAGTAACGGAAGTGTGCGAAGGTA-GCT 71201 Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 || |||| ||||| || | | || | || || ||||| || |||||| || || Sbjct 71202 CAAGCTGGACGGAAATCAGCTGGAGAGCGTAATGGTAAAAGCTTGCCTGACTGTGAGACT 71261 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCC-GGCGGTGCTGAATGGAACGG 304 |||||| | ||| |||||||||||| | || ||| || || | | || ||||| || Sbjct 71262 TACAAGTCGAACAGAGACGAAAGTCGGCCATAGTGACCCGGGAGTTTCTTGGTGGAAAGG 71321 Query 305 CCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | ||| || |||||| |||| ||| || |||||| Sbjct 71322 CTCTCGATCAACGGATCAAAGGTACGCTAGGGATA 71356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982398428160