Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq149 109 6e-22 seq148 107 2e-21 >seq149 Length=72121 Score = 109 bits (120), Expect = 6e-22 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 ||||||| |||| | |||| | || |||||||||| || | | ||||||||||||| Sbjct 14334 GGGTCTTACCGTCTACTTTCGGGAACTCCGCATCTTCACGGAGAATTCAATTTCACTGAG 14275 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 ||| | | ||||||| ||||||||| ||||||||||||||||||||| Sbjct 14274 ATCATGTTGGAGACAGCGGGGAAGTCGTGACACCATTCATGCAGGTCGGAACTTACCCGA 14215 Query 145 CAAGGAATTTCGCT 158 |||||||||||||| Sbjct 14214 CAAGGAATTTCGCT 14201 Score = 105 bits (116), Expect = 7e-21 Identities = 102/134 (76%), Gaps = 1/134 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 ||||||| |||| | |||| | || |||||||||| || | | ||||||||||||| Sbjct 70938 GGGTCTTACCGTCTACTTTCGGGAACTCCGCATCTTCACGGAGAATTCAATTTCACTGAG 70879 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 ||| | | ||||||| ||||||||| ||||||||||||||||||||| Sbjct 70878 ATCATGTTGGAGACAGCGGGGAAGTCGTGACACCATTC-TGCAGGTCGGAACTTACCCGA 70820 Query 145 CAAGGAATTTCGCT 158 |||||||||||||| Sbjct 70819 CAAGGAATTTCGCT 70806 >seq148 Length=122497 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 51836 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 51777 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 || | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 51776 -TCTCTCTCCGAGACAGTGCCCTGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 51718 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 51717 ACAAGGAATTTCGCTACCTTAGGACCGTTA 51688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547199151840