Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq148 230 5e-58 seq149 158 2e-36 >seq148 Length=122497 Score = 230 bits (254), Expect = 5e-58 Identities = 249/326 (76%), Gaps = 17/326 (5%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || || |||||||||||||||||| Sbjct 48142 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCTCACTGCTGCCTCCCGTAG 48083 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||||| || ||||| ||| Sbjct 48082 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACTGAT 48023 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | | | |||||| || |||| ||||||||| | |||||| ||||| ||||||||| | Sbjct 48022 CATTGCCTTGGTAAGCCATTACCTCACCAACAAGCTAATCAGCCGCAAGCCCATCTCTTG 47963 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 ||||| ||| || | | | ||| | || || | ||||||||| || Sbjct 47962 GCGAT-----TTT--------CATCTTTCACTTCTCAG-CAATACGAGGTATTAGCCATC 47917 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||||||| ||| | || ||| ||||| ||||| || ||||||||| ||||||||||| Sbjct 47916 GTTTCCAATGGTTGTCCCTCTCCAAAAGGTAGGTT-CTTACGTGTTACGCACCCGTCCGC 47858 Query 301 CACTAAGCTATATATCCAGCAAGCTT 326 |||| | || | || ||||||||| Sbjct 47857 CACTCA-TTACA-ATAAAGCAAGCTT 47834 >seq149 Length=72121 Score = 158 bits (174), Expect = 2e-36 Identities = 137/170 (81%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||||| |||| |||||||| |||||| || |||||||||| | || | | || | Sbjct 19396 GCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCTCACTGCTGCCGCTCGAAAGCGTTT 19337 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 |||||||||||||||||||||||||| | ||| |||||||| | |||| |||| | || Sbjct 19336 GGGCCGTGTCTCAGTCCCAATGTGGCTGATCATCCTCTCAGATCAGCTAAGGATCTTTGG 19277 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCT 176 ||||| |||| ||| | ||||||||||||||| ||| ||| ||||| Sbjct 19276 CTTGGGAGGCTTTTACCCTACCAACTACCTAATCCTACGCAAGCTCATCT 19227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998398402560