Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq153 98.7 1e-18 seq150 98.7 1e-18 seq135 98.7 1e-18 seq133 98.7 1e-18 seq132 98.7 1e-18 seq131 98.7 1e-18 seq48 98.7 1e-18 seq47 98.7 1e-18 seq46 98.7 1e-18 seq45 98.7 1e-18 seq44 98.7 1e-18 seq43 98.7 1e-18 >seq153 Length=26000 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 1981 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 2038 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 2039 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 2083 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 11651 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 11708 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 11709 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 11753 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 21324 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 21381 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 21382 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 21426 >seq150 Length=18504 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 9212 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 9155 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 9154 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 9110 >seq135 Length=11379 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 1589 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 1532 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 1531 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 1487 >seq133 Length=496414 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 492896 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 492839 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 492838 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 492794 >seq132 Length=16748 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 3266 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 3209 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 3208 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 3164 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 6585 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 6528 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 6527 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 6483 Score = 89.7 bits (98), Expect = 6e-16 Identities = 68/78 (87%), Gaps = 2/78 (3%) Strand=Plus/Minus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| || |||||||||||||||| Sbjct 16225 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGC-TGCTTTGAACACTCTA 16167 Query 92 ATTTTCTCAAGGTAAAAG 109 |||| ||||| |||| || Sbjct 16166 ATTTACTCAAAGTAACAG 16149 >seq131 Length=14598 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 3422 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 3365 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 3364 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 3320 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 14576 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 14519 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 14518 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 14474 >seq48 Length=14181 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 12118 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 12061 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 12060 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 12016 >seq47 Length=30587 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 9594 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 9537 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 9536 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 9492 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 30065 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 30008 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 30007 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 29963 >seq46 Length=41367 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 5447 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 5390 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 5389 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 5345 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 15122 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 15065 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 15064 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 15020 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 34468 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 34411 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 34410 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 34366 Score = 96.9 bits (106), Expect = 4e-18 Identities = 69/78 (88%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 24772 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 24713 Query 92 ATTTTCTCAAGGTAAAAG 109 |||| ||||| |||| || Sbjct 24712 ATTTACTCAAAGTAACAG 24695 >seq45 Length=21540 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 9038 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 8981 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 8980 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 8936 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 18710 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 18653 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 18652 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 18608 >seq44 Length=10074 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 106 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 49 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 48 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 4 Score = 96.9 bits (106), Expect = 4e-18 Identities = 69/78 (88%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 10058 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 9999 Query 92 ATTTTCTCAAGGTAAAAG 109 |||| ||||| |||| || Sbjct 9998 ATTTACTCAAAGTAACAG 9981 >seq43 Length=39912 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 9036 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 8979 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 8978 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 8934 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 24130 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 24073 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 24072 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 24028 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 33767 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 33710 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 33709 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 33665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199077440