Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq149 120 3e-25 seq148 109 5e-22 >seq149 Length=72121 Score = 120 bits (132), Expect = 3e-25 Identities = 123/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| |||||| | |||| | | ||| || |||| ||||| || || Sbjct 20362 TCGAGTTGCAGAGAACAATCTGAACTAGGGCAAGTTTTTTGAGATTTGCTCCGACTTTCG 20303 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | || || || |||| |||||||||| ||||||| ||||| |||||||||| || Sbjct 20302 TCATTGCTGCTCTTTGTACTTACCATTGTAACACGTGTGTAGCCCAGCCCATAAGGGTCA 20243 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 |||||||||||||| ||||| |||||||| |||| |||| Sbjct 20242 TGAGGACTTGACGTGATCCCTCCCTTCCTCTAGTTTATCAC 20202 >seq148 Length=122497 Score = 109 bits (120), Expect = 5e-22 Identities = 120/160 (75%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| || ||| || | || ||| ||||||||| Sbjct 49026 CGAGTTGCAGCCTGCAATCCGAACTGAGACCGGGTTTTTGAGGTTGGCTAGCCCTCGCGG 48967 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 ||| || | || ||| |||||||| ||||||| |||| | |||||| ||| Sbjct 48966 GTTTGCATCTCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGACGTAAGGGGCAT 48907 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 | ||||||||||||||| ||||||||||||| ||||||| Sbjct 48906 GCTGACTTGACGTCATCCTCACCTTCCTCCGGCTTGTCAC 48867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415999355200