Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq148 291 2e-76 seq149 185 2e-44 >seq148 Length=122497 Score = 291 bits (322), Expect = 2e-76 Identities = 307/404 (76%), Gaps = 0/404 (0%) Strand=Plus/Plus Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64 |||||| |||| ||||||||| ||||||||||||||||||| || ||| || ||| Sbjct 48207 TGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGC 48266 Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124 |||||||||||| | ||||||||||| || |||||||| ||| ||||| || ||| Sbjct 48267 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTCAAAAGTCTCCTGTCAAA 48326 Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184 | | |||| ||||| ||| | || |||||| ||||||||| | ||||||| Sbjct 48327 GATCAGGGCTTAACCCTGGGCCGGCAGGAGAAACTCTGAGGCTAGAGTTTGGTAGGGGCA 48386 Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244 |||||||| ||| |||||||||||||||||| || |||||||||||| |||||| Sbjct 48387 GAGGGAATTCCCGGTGGAGCGGTGAAATGCGTAGAGATCGGGAGGAACACCAAAGGCGAA 48446 Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304 || |||||| | ||||||||||||| |||||||| |||||||||| ||||| Sbjct 48447 AGCACTCTGCTGGGCCACAACTGACACTGAGAGACGAAAGCGAGGGGAGCAAAAGGGATT 48506 Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGC 364 |||||||| ||||||| |||||||||||||| ||||||| ||| || | ||| Sbjct 48507 AGATACCCCTGTAGTCCTCGCCGTAAACGATGGATACTAGATGTTGGATAGGTTAAAGCA 48566 Query 365 TCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | || || ||| ||||| |||||| || ||||||||||| Sbjct 48567 TTCAGTATCGGAGCTAACGCGTGAAGTATCCCGCCTGGGGAGTA 48610 >seq149 Length=72121 Score = 185 bits (204), Expect = 2e-44 Identities = 245/332 (74%), Gaps = 10/332 (3%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 ||| |||||| || |||||||||||||||||||||||| ||||| |||||||| || Sbjct 19476 AAGTCCCGGCCAATCTCGTGCCAGCAGCCGCGGTAATACGAGAGGGGCGAGCGTTATTCG 19535 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT-GAAAGGCT-AT 130 |||| | ||||||||||| | |||||| ||||| || || | | || | || | Sbjct 19536 GAATGATTGGGCGTAAAGCGCACGTAGGCGGTTTAGAAAATCCAAAATCGAGAATCTCAA 19595 Query 131 GGCTCAACCCCGGGACTGCTTTT--GAAACTGCAGGGCTAGAGT--GCAGGAGGGGCAAG 186 |||| || | || |||| | | | | | || |||| | | |||| | | Sbjct 19596 AGCTCTACTTTGAGAAGTATTTTCTGTGATTCCTAGACTTGAGTAAGTAAGAGGAGAA-- 19653 Query 187 TGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGG 246 |||||||||| |||||| ||| ||||| || ||||| ||||||||||||| || |||| Sbjct 19654 TGGAATTCCTGGTGTAGAGGTAAAATGTGTTGATATCAGGAGGAACACCAAAAGCAAAGG 19713 Query 247 CGGCTTGCTGG-ACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTA 305 | | |||| ||| || ||||| ||||| ||| |||||||||| |||| |||||| Sbjct 19714 CAATTCTCTGGTACTCTA-CTGACGTTGAGGTGCGACAGCGTGGGGATCAAAAGGGATTA 19772 Query 306 GATACCCTGGTAGTCCACGCCGTAAACGATGA 337 ||||||| |||||||||||||| |||||||| Sbjct 19773 GATACCCCTGTAGTCCACGCCGTCAACGATGA 19804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203198074880