Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq148 141 2e-31 seq32 107 4e-21 seq149 82.4 1e-13 >seq148 Length=122497 Score = 141 bits (156), Expect = 2e-31 Identities = 181/243 (74%), Gaps = 11/243 (5%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| || || ||||||||| ||| | | | ||| | ||| |||| Sbjct 49792 GGTGGATACCTAGGCACCTAGAGACGATGAAGGGCGTGGAACCGA-CGAAACGCTTCGGG 49850 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||||| | ||||||| ||||| |||||| ||| |||| ||| || Sbjct 49851 GAGTTGG-AAACAAGCAGTGATCCGGAGATTCCCGAATAGGGCAACCT----CTT---GT 49902 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 || | |||||| |||||| | || || ||| | | |||||||||||||| ||| Sbjct 49903 ACTTCTAC-CTGAATTCATAGGGTAGAAAGAGGCAACTCAGTGAACTGAAACATCTTAGT 49961 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||| || Sbjct 49962 AGCTGAAGGAAAAGAAAGCAAACGCGATTCCCTGAGTAGTGGCGAGCGAAATGGGAACAG 50021 Query 249 CCT 251 ||| Sbjct 50022 CCT 50024 >seq32 Length=3221238 Score = 107 bits (118), Expect = 4e-21 Identities = 77/89 (87%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 163 AACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAA 222 ||| | |||||||||||||||| |||||||| ||||||||||| ||| | ||||||| Sbjct 2844771 AACTCAGCGAACTGAAACATCTTAGTAGCTGAAGGAAAAGAAAGCAAACTCGATTCCCTG 2844830 Query 223 AGTAGTGGCGAGCGAAATGGGATGAGCCT 251 |||||||||||||||||||||| ||||| Sbjct 2844831 AGTAGTGGCGAGCGAAATGGGAACAGCCT 2844859 >seq149 Length=72121 Score = 82.4 bits (90), Expect = 1e-13 Identities = 70/85 (82%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 171 GAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGG 230 |||||||||||||| |||| || ||||||| ||||||||||||| ||| |||||||| Sbjct 11781 GAACTGAAACATCTCAGTAACTAGAGGAAAAAAAATCAACCGAGACTCCGTTAGTAGTGG 11840 Query 231 CGAGCGAAATGGGATGA-GCCTTTA 254 ||||||| |||| | ||||||| Sbjct 11841 TGAGCGAACACGGATTAGGCCTTTA 11865 Score = 80.6 bits (88), Expect = 5e-13 Identities = 68/84 (81%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 171 GAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGG 230 |||||||||||||| |||| || ||||||| ||||||||||||| ||| |||||||| Sbjct 68405 GAACTGAAACATCTCAGTAACTAGAGGAAAAAAAATCAACCGAGACTCCGTTAGTAGTGG 68464 Query 231 CGAGCGAAATGGGATGAGCCTTTA 254 ||||||| |||| || | ||| Sbjct 68465 TGAGCGAACACGGATTAGGCCTTA 68488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918398530560