Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq148 179 8e-43 seq149 141 2e-31 >seq148 Length=122497 Score = 179 bits (198), Expect = 8e-43 Identities = 215/295 (73%), Gaps = 19/295 (6%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| | || ||| ||| Sbjct 48243 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAA------------ 48196 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| || | ||||||||||||||| || ||| |||||||||||||||| Sbjct 48195 ------TATTCTTCTCTGAGAAAAGAAGTTTACAACCCATAGG-CCTTCATCCTTCACGC 48143 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| || |||||||||||||||||||||||| Sbjct 48142 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCTCACTGCTGCCTCCCGTAG 48083 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | |||||||||| | ||| || Sbjct 48082 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACTGAT 48023 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295 | | | || ||| ||| ||||| | || || | ||||| |||| |||||| Sbjct 48022 CATTGCCTTGGTAAGCCATTACCTCACCAACAAGCTAATCAGCCGCAAGCCCATC 47968 >seq149 Length=72121 Score = 141 bits (156), Expect = 2e-31 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 106 CTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCAC 165 ||||||| ||||| | | ||||| |||| || ||| |||||| |||||||||||||| Sbjct 19417 CTTCATCACCCACGCGATATAGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCTCAC 19358 Query 166 TGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTC 225 ||||||| | || | | |||||| |||||||||||| ||||||||| || | ||||||| Sbjct 19357 TGCTGCCGCTCGAAAGCGTTTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATCCTCTC 19298 Query 226 AGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACG 285 ||| | ||| ||| | |||| || ||| |||||| || |||||||||| ||| Sbjct 19297 AGATCAGCTAAGGATCTTTGGCTTGGGAGGCTTTTACCCTACCAACTACCTAATCCTACG 19238 Query 286 CATCCCCATCGTACACCG 303 || | |||| ||| || Sbjct 19237 CAAGCTCATCTCACAACG 19220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068798289920