Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq153 91.5 2e-16 seq150 91.5 2e-16 seq136 91.5 2e-16 seq135 91.5 2e-16 seq132 91.5 2e-16 seq131 91.5 2e-16 seq47 91.5 2e-16 seq46 91.5 2e-16 seq45 91.5 2e-16 seq44 91.5 2e-16 seq43 91.5 2e-16 >seq153 Length=26000 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 7018 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 6962 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 6961 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 6902 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 6901 GGAGCGGGGTCAT 6889 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 16693 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 16637 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 16636 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 16577 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 16576 GGAGCGGGGTCAT 16564 >seq150 Length=18504 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 13845 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 13901 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 13902 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 13961 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 13962 GGAGCGGGGTCAT 13974 Score = 86.0 bits (94), Expect = 1e-14 Identities = 126/170 (74%), Gaps = 10/170 (6%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | || | |||| |||| || Sbjct 4208 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAATCGCTC--GCCTGAAAAGGCGGT 4263 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | || ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 4264 GG-GCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 4322 Query 121 GAACGGGGTGATTCTCTCC--TGCACATCGTAGTCGGATACGAATAGGCT 168 || |||||| | ||| ||| || || || | || ||| |||||||| Sbjct 4323 GAGCGGGGTCA-TCTGTCCAATGAACGTC--ACCCGACTACCAATAGGCT 4369 >seq136 Length=10821 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 2710 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 2766 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 2767 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 2826 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 2827 GGAGCGGGGTCAT 2839 >seq135 Length=11379 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 6222 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 6278 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 6279 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 6338 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 6339 GGAGCGGGGTCAT 6351 >seq132 Length=16748 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 11218 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 11274 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 11275 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 11334 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 11335 GGAGCGGGGTCAT 11347 >seq131 Length=14598 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 8050 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 8106 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 8107 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 8166 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 8167 GGAGCGGGGTCAT 8179 >seq47 Length=30587 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 4551 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 4607 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 4608 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 4667 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 4668 GGAGCGGGGTCAT 4680 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 14227 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 14283 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 14284 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 14343 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 14344 GGAGCGGGGTCAT 14356 >seq46 Length=41367 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 406 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 462 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 463 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 522 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 523 GGAGCGGGGTCAT 535 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 10080 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 10136 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 10137 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 10196 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 10197 GGAGCGGGGTCAT 10209 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 39103 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 39159 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 39160 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 39219 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 39220 GGAGCGGGGTCAT 39232 Score = 89.7 bits (98), Expect = 8e-16 Identities = 103/134 (77%), Gaps = 5/134 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 19756 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 19812 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC- 119 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| ||||||| Sbjct 19813 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCCT 19872 Query 120 -AGAACGGGGTGAT 132 || |||||| || Sbjct 19873 AGGAGCGGGGTCAT 19886 Score = 82.4 bits (90), Expect = 1e-13 Identities = 102/133 (77%), Gaps = 5/133 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||| |||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 29427 GTACGAGAG-AACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 29482 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 29483 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 29542 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 29543 GGAGCGGGGTCAT 29555 >seq45 Length=21540 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 3782 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 3838 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 3839 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 3898 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 3899 GGAGCGGGGTCAT 3911 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 13670 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 13726 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 13727 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 13786 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 13787 GGAGCGGGGTCAT 13799 >seq44 Length=10074 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 4740 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 4796 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 4797 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 4856 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 4857 GGAGCGGGGTCAT 4869 >seq43 Length=39912 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 13669 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 13725 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 13726 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 13785 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 13786 GGAGCGGGGTCAT 13798 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 28759 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 28815 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 28816 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 28875 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 28876 GGAGCGGGGTCAT 28888 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 38378 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 38434 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 38435 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 38494 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 38495 GGAGCGGGGTCAT 38507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819198730240