Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20variabilis_20[refseq_20GCF_5F000147415.1_202010-09-16] 414 sequences; 46,159,512 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq64 266 5e-69 seq3 266 5e-69 >seq64 Length=12886 Score = 266 bits (294), Expect = 5e-69 Identities = 182/203 (90%), Gaps = 3/203 (1%) Strand=Plus/Plus Query 34 TGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATC 93 |||||||| |||||||||||| ||| |||||||||||| || ||||||||| ||||||| Sbjct 4962 TGATGACTTGCGCTTACTAGGCATT-CCTCGTTGAAGATTAATAATTGCAATAATCTATC 5020 Query 94 CCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTT 153 |||||||||||| | ||||||||||||||||| ||| |||||||||| ||| |||||| Sbjct 5021 CCCATCACGATGCAGTTTCAAAGATTACCCGGGCCTCTCGGCCAAGGC--TAGGCTCGTT 5078 Query 154 GAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 213 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5079 GAATGCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 5138 Query 214 TTGCCTCAAACTTCCGTGGCCTA 236 |||||||| ||||| | | ||| Sbjct 5139 TTGCCTCATGCTTCCATTGGCTA 5161 >seq3 Length=2414369 Score = 266 bits (294), Expect = 5e-69 Identities = 182/203 (90%), Gaps = 3/203 (1%) Strand=Plus/Plus Query 34 TGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATC 93 |||||||| |||||||||||| ||| |||||||||||| || ||||||||| ||||||| Sbjct 453164 TGATGACTTGCGCTTACTAGGCATT-CCTCGTTGAAGATTAATAATTGCAATAATCTATC 453222 Query 94 CCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTT 153 |||||||||||| | ||||||||||||||||| ||| |||||||||| ||| |||||| Sbjct 453223 CCCATCACGATGCAGTTTCAAAGATTACCCGGGCCTCTCGGCCAAGGC--TAGGCTCGTT 453280 Query 154 GAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 213 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 453281 GAATGCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 453340 Query 214 TTGCCTCAAACTTCCGTGGCCTA 236 |||||||| ||||| | | ||| Sbjct 453341 TTGCCTCATGCTTCCATTGGCTA 453363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751996984010